BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B12LP1|AL430186
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig648 1110 0.0
3x_Contig1659 657 0.0
>3x_Contig648
Length = 1819
Score = 1110 bits (557), Expect = 0.0
Identities = 566/571 (99%)
Strand = Plus / Minus
Query: 381 tatactagaaaaaccaaaaccataaaaaccctttaacgaaaaamaaaataccaacacaca 440
|||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1779 tataataggaaaaccaaaaccataaaaaccctttaacgaaaaaaaaaataccaacacaca 1720
Query: 441 ttcttcattttattattattcaccctgtctatctcaacattatcatttttttttcatatc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 ttcttcattttattattattcaccctgtctatctcaacattatcatttttttttcatatc 1660
Query: 501 ataaagtatcatatcattcgtattatctctctatctctttctttttctttcccttagtat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 ataaagtatcatatcattcgtattatctctctatctctttctttttctttcccttagtat 1600
Query: 561 cggcttatccgagctataccatcgaacttcaccaaaaacacgaaamasatgacattacac 620
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1599 cggcttatccgagctataccatcgaacttcaccaaaaacacgaaaaagatgacattacac 1540
Query: 621 actttatgcaggatgttaacccacctctaataacttatttatttatttttgacgttatga 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 actttatgcaggatgttaacccacctctaataacttatttatttatttttgacgttatga 1480
Query: 681 aatacacatacatgcttatcttaactacttcttttgactcataccagtttgttgccgctt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 aatacacatacatgcttatcttaactacttcttttgactcataccagtttgttgccgctt 1420
Query: 741 atgacgcattcggccgcatcttcttagtaacagccagacaaagaattgtgactcagcgca 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 atgacgcattcggccgcatcttcttagtaacagccagacaaagaattgtgactcagcgca 1360
Query: 801 tgatatccaactgaaaacaggaaagcgatgctagtaaaagcacatataccttgcagtatc 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 tgatatccaactgaaaacaggaaagcgatgctagtaaaagcacatataccttgcagtatc 1300
Query: 861 tgcagcagcaaaatatgcagattttgtcgattcggagctatatggaactccaacggaact 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 tgcagcagcaaaatatgcagattttgtcgattcggagctatatggaactccaacggaact 1240
Query: 921 atgtagatctccaaactcattacttggttgc 951
|||||||||||||||||||||||||||||||
Sbjct: 1239 atgtagatctccaaactcattacttggttgc 1209
>3x_Contig1659
Length = 17570
Score = 657 bits (330), Expect = 0.0
Identities = 337/340 (99%)
Strand = Plus / Minus
Query: 1 atccaaaggaaggtgaagcttgggaaaccccattgtctcacactttcaacgctgaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atccaaaggaaggtgaagcttgggaaaccccattgtctcacactttcaacgctgaacaaa 281
Query: 61 tcgaatggttcaaggccggttctgctttgaacagattggctaacgccaagaaggctaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tcgaatggttcaaggccggttctgctttgaacagattggctaacgccaagaaggctaaga 221
Query: 121 actgaatagatcaaatttttcaagtataaatttgacctcttctcttcttttggttcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 actgaatagatcaaatttttcaagtataaatttgacctcttctcttcttttggttcaatc 161
Query: 181 aacatcaaaaacaaagcacaaatttccctcccacttacaacccccccatattatttattt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 160 aacatcaaaaacaaagcacaaattcccctcccacttacaacccccccatattatttattt 101
Query: 241 ctaactcttcttttatccatcgttttttgcactttcacatctgctcttagagaccattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ctaactcttcttttatccatcgttttttgcactttcacatctgctcttagagaccattca 41
Query: 301 aatattccctaagatttcaaasatttgatatcatcaaata 340
|||||||||||||| |||||| ||||||||||||||||||
Sbjct: 40 aatattccctaagacttcaaagatttgatatcatcaaata 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9541
Number of Sequences: 1807
Number of extensions: 9541
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 2
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)